BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB016E05LP1|AL427020
(460 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig285 120 3e-27
>3x_Contig285
Length = 777
Score = 120 bits (59), Expect = 3e-27
Identities = 78/87 (89%)
Strand = Plus / Minus
Query: 374 taasaasaaaatyattaacaccgcatccccaactactaacacattaaataattcatgatt 433
||| || ||||| ||||| ||||||| |||||||||||| ||||||||||||| ||||||
Sbjct: 774 taagaagaaaattattaagaccgcatgcccaactactaagacattaaataattgatgatt 715
Query: 434 tccccttaamacttgattacctggtgc 460
||| ||||| |||||||||||||||||
Sbjct: 714 tccgcttaaaacttgattacctggtgc 688
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.715 1.33
Gapped
Lambda K H
1.40 0.715 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2797
Number of Sequences: 1807
Number of extensions: 2797
Number of successful extensions: 59
Number of sequences better than 1.0e-20: 1
length of query: 460
length of database: 10,358,551
effective HSP length: 15
effective length of query: 445
effective length of database: 10,331,446
effective search space: 4597493470
effective search space used: 4597493470
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.4 bits)
S1: 12 (24.8 bits)
S2: 49 (99.8 bits)